The following are software resources by some PMG members:

Blei Lab

Most of the group's published work is attached to open-source software. See Blei Lab's GitHub.

Califano Lab

The Califano Lab uses systems biology principles to elucidate and then investigate cell regulatory networks. Visit the lab's software page.  

Pe'er Lab

The group focuses on deveopment and application of novel computational methods in human genetics. Visit the labs's software page. 

Rabadan Lab

The Rabadan Lab focuses on three distinct topics: cancer, infectious diseases and electronic health records. Visit Rabadan Lab GitHub. 

Yates Lab

Research in the Yates Lab integrate theoretical and computational tools with more traditional experimental approaches to study lymphocyte dynamics. For the latest, see Yates' GitHub.