Rozenfeld R, Bushlin I, Gomes I, Tzavaras N, Gupta A, Neves S, Battini L, Gusella GL, Lachmann A , Ma'ayan A, Blitzer RD, Devi LA. Receptor heteromerization expands the repertoire of cannabinoid signaling in rodent neurons. PLoS One. 2012;7(1):e29239. 

Dannenfelser R, Lachmann A , Szenk M, Ma'ayan A. FNV: light-weight flash-based network and pathway viewer. Bioinformatics. 2011 Apr 15;27(8):1181-2. 

Lachmann A , Xu H, Krishnan J, Berger SI, Mazloom AR, Ma'ayan A. ChEA: transcription factor regulation inferred from integrating genome-wide ChIP-X experiments. Bioinformatics. 2010 Oct 1;26(19):2438-44. 

Xiao K, Sun J, Kim J, Rajagopal S, Zhai B, Villén J, Haas W, Kovacs JJ, Shukla AK, Hara MR, Hernandez M, Lachmann A , Zhao S, Lin Y, Cheng Y, Mizuno K, Ma'ayan A, Gygi SP, Lefkowitz RJ. Global phosphorylation analysis of beta-arrestin-mediated signaling downstream of a seven transmembrane receptor (7TMR). Proc Natl Acad Sci U S A. 2010 Aug 24;107(34):15299-304. 

Lachmann A , Ma'ayan A.  Lists2Networks: integrated analysis of gene/protein lists. BMC Bioinformatics. 2010 Feb 12;11:87. 

Hernandez M, Lachmann A , Zhao S, Xiao K, Ma'ayan A.  Inferring the Sign of Kinase-Substrate Interactions by Combining Quantitative Phosphoproteomics with a Literature-Based Mammalian Kinome Network. Proc IEEE Int Symp Bioinformatics Bioeng. 2010;2010:180-184.

MacArthur BD, Lachmann A , Lemischka IR, Ma'ayan A.  GATE: software for the analysis and visualization of high-dimensional time series expression data. Bioinformatics. 2010 Jan 1;26(1):143-4. 

Lachmann A , Ma'ayan A.  KEA: kinase enrichment analysis. Bioinformatics. 2009 Mar 1;25(5):684-6. 

Lachmann A, Riedewald M. Finding relevant patterns in bursty sequences. Proceedings of the VLDB Endowment. 2008 Aug;1(1):78-89.