Lammers NC, Galstyan V, Reimer A, Medin SA, Wiggins CH, Garcia HG. Multimodal transcriptional control of pattern formation in embryonic development. Proc Natl Acad Sci U S A. 2020 Jan 14;117(2):836-847. doi: 10.1073/pnas.1912500117. 

Mayya V, Judokusumo E, Abu Shah E, Peel CG, Neiswanger W, Depoil D, Blair DA, Wiggins CH, Kam LC, Dustin ML. Durable Interactions of T Cells with T Cell Receptor Stimuli in the Absence of a Stable Immunological Synapse. Cell Rep. 2018 Jan 9.

Walczak AM, Mugler A, Wiggins CH. A stochastic spectral analysis of transcriptional regulatory cascades Proc Natl Acad Sci U S A. 2009 Apr 21;106(16):6529-34.

Hofman JM, Wiggins CH. Bayesian approach to network modularity . Phys Rev Lett. 2008 Jun 27;100(25):258701.

Koster DA, Wiggins CH, Dekker NH. Multiple events on single molecules: unbiased estimation in single-molecule biophysics . Proc Natl Acad Sci U S A. 2006 Feb 7;103(6):1750-5

Middendorf M, Ziv E, Wiggins CH. Inferring network mechanisms: the Drosophila melanogaster protein interaction network . Proc Natl Acad Sci U S A. 2005 Mar 1;102(9):3192-7

Middendorf M, Kundaje A, Shah M, Freund Y, Wiggins CH, Leslie CS.  Motif discovery through predictive modeling of gene regulation. In Satoru Miyano, ed. Proceedings of Ninth Annual International Conference on Research in Computational Molecular Biology (RECOMB 2005), special “Lecture Notes in Bioinformatics,” pages 538–552. Springer: New York, 2005.