December 11, 2014 - 2:00pm
Cell Memory in MAPK Signaling
Eugenia Lyashenko
(Vitkup Lab)
December 11, 2014 - 10:30am
Know Thy Cells: How to Avoid an Identity Crisis with Cell Line Authentication
Lisa M. Ortuno
(Promega)
December 10, 2014 - 2:00pm
Bringing P4 Medicine into Action: The 100 Person Wellness Project
Nathan Price
(Institute for Systems Biology)
December 9, 2014 - 1:00pm
Quantitative Characterization of TCR Repertoires for Immune Profiling of Human Tissue Samples
Boris Grinshpun
(Yufeng Shen Lab)
November 19, 2014 - 2:00pm
Understanding Molecular Mechanisms of Human Disease Mutations and Coding Variants through 3D Protein Networks
Haiyuan Yu
(Weill Institute for Cell & Molecular Biology, Cornell University)
November 18, 2014 - 1:00pm
Systems Biology Student Seminar/Journal Club
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November 18, 2014 - 9:00am
Computational Integration of Genome-wide Functional and Observational Data in Cancer
Felix Sanchez Garcia
(D. Pe'er and I. Pe'er Labs)
November 11, 2014 - 1:00pm
Predicting Drug Targets Using Systems and Structural Biology Approaches
Joshua Broyde
(Honig Lab)
November 6, 2014 - 4:00pm
SeaWAS: Season-Wide Association Study
Mary Boland
(Tatonetti Lab)
October 3, 2014 - 12:00pm
Lymphoid Development and Malignancy Program
Adolfo Ferrando and Kara Kelly
October 2, 2014 - 4:00pm
Somatic Mutations Modulate ceRNA Drivers of Tumorigenesis
Jing He
(Califano Lab)
October 2, 2014 - 2:00pm
Novel Approaches to Identify Function Roles of Somatic Genetic Alterations in Cancer
Rachel Melamed
(Rabadan Lab)
October 1, 2014 - 1:00pm
Exploring Tumor Heterogeneity Using 30 Dimensions in Single Cells
Dana Pe'er
(Department of Systems Biology)
September 25, 2014 - 11:00am
Structure Based Genome Scale Reconstruction of the Mycobacterium Tuberculosis Metabolic Network
Mariam Konaté
(Vitkup Lab)
September 18, 2014 - 4:00pm
Plate Bias and Its Effect on Gene Expression
Alexander Lachmann
(Califano Lab)
September 15, 2014 - 10:00am
Structure Function Analysis of Drug Resistance Driver Mutations in Acute Lymphoblastic Leukemia
Zachary Carpenter
(Rabadan and Ferrando Labs)
August 27, 2014 - 3:00pm
The Rapidly Expanding Universe of Giant Viruses
Jean-Michel Claverie & Chantal Abergel
(Aix-Marseille University School of Medicine)
July 17, 2014 - 1:00pm
Relative or Absolute? How Do Cells Perceive EGF signals?
Eugenia Lyashenko
(Vitkup Lab)
June 30, 2014 - 1:30pm
Mutual Effects Between Distant Genes in Cellular Networks
Hanah Margalit
(Hebrew University of Jerusalem)
June 25, 2014 - 3:00pm
The Mystery and Power of Noncoding RNAs
Michael McManus
(UCSF School of Medicine)
June 9, 2014 - 3:00pm
Quantitative Modeling of Transcription Factor Binding Specificities Using DNA Shape
Remo Rohs
(University of Southern California)
June 9, 2014 - 12:00pm
Regulatory Variation and Human Disease
Matthew Maurano
(University of Washington)
May 30, 2014 - 9:00am
Department of Systems Biology / MAGNet Annual Retreat
Department of Systems Biology Faculty Members
May 28, 2014 - 1:00pm
Probing Cell Death with Small Molecules
Brent Stockwell
(Departments of Chemistry, Biological Sciences, and Systems Biology)
May 27, 2014 - 4:30pm
Lessons from the Fly: From Development to Behavior
Richard Mann
(Higgins Professor of Biochemistry & Molecular Biophysics)
May 14, 2014 - 4:00pm
Noncoding RNAs and Networks of Gene Control
Phil Sharp
(Massachusetts Institute of Technology)
May 5, 2014 - 1:00pm
FeatureP: a prediction aggregator for differential annotation of protein sequence variants
Jose M. G. Izarzugaza
(Technical University of Denmark (DTU))
May 1, 2014 - 4:00pm
Analysis of Trans eSNPs Infers Regulatory Network Architecture
Anat Kreimer
(Itsik Pe'er Lab)
April 24, 2014 - 4:00pm
Machine Learning Based Somatic Mutation Calling in Whole Genome Sequencing Data from Formalin-Fixed, Paraffin-Embedded (FFPE) Tumor Samples
Jung Hoon Woo
(Califano Lab)
April 23, 2014 - 3:00pm
Regulatory RNAs
Nikolaus Rajewsky
(Director, Berlin Institute for Medical Systems Biology, Max Delbruck Center for Molecular Medicine Berlin, Germany)
April 22, 2014 - 1:00pm
Using Clinical Data to Predict Novel Cancer Driver Genes
Rachel Melamed
(Rabadan Lab)
April 3, 2014 - 12:00pm
Single Cell Dynamics of Cell Fate Decisions
Sabrina Leigh Spencer
(Stanford School of Medicine)
April 2, 2014 - 3:00pm
Single Cell Transcriptomics: Exploring Cellular Heterogeneity in Immune Response
Rahul Satija
(Broad Institute)
March 31, 2014 - 12:00pm
Using Optogenetics to Dissect Information Processing in Cell Signaling Networks
Jared Toettcher
(University of California, San Francisco)
March 26, 2014 - 3:00pm
Population and Personalized Genomics: Going Deep to Learn Human Biology and Disease
Emmanouil (Manolis) Dermitzakis
(University of Geneva)
March 24, 2014 - 1:00pm
Single-Cell RNA Sequencing: Technological Development and Application to Personalized Cancer Diagnosis and Treatment
Ambrose Carr
(Dana Pe'er Lab)
March 10, 2014 - 1:00pm
Affected Biological Processes and the Genotype to Phenotype Relationships in Autism Spectrum Disorders
Jonathan Chang
(Vitkup Lab)
February 26, 2014 - 11:00am
Probability Models of Genomic Sequences Give Protein 3D, Mutation Effects and Design
Deborah Marks
(Harvard University)
February 24, 2014 - 1:00pm
Getting Wet in Computational Biology: Developing High-Throughput Experiments in the World of High Technology
Forest Ray
(Califano Lab)
February 24, 2014 - 11:00am
Algorithms with Ubiquitous Genetic Information
Yaniv Erlich
(Massachusetts Institute of Technology)
February 20, 2014 - 6:00pm
Transcriptome Sequencing Uncovers the Landscape of Functional Variation in the Human Genome
Tuuli Lappalainen
(New York Genome Center and Department of Systems Biology)
February 20, 2014 - 4:30pm
Long Molecular Dynamics Simulations of Proteins: Progress, Promise, and Challenges
David E. Shaw
(Center for Computational Biology and Bioinformatics)
February 19, 2014 - 3:00pm
Engineering Cooperative Nanosystems for Cancer Diagnosis and Therapy
Sangeeta Bhatia
(Massachusetts Institute of Technology)
February 5, 2014 - 3:00pm
Integrative Structural Biology
Andrej Sali
(University of California, San Francisco)
February 3, 2014 - 1:00pm
Topological Complexes in Phylogenomics
Kevin Emmett
(Wiggins and Rabadan Labs)