Search Publications

N Abuaf, F Leynadier, H Luce, J Dry .  1981.   Haemoglobin content of multilayer E rosettes is a parameter of activated human T lymphocytes.. Clinical and experimental immunology. 44 (1) :145-51 Go to Pubmed
Demis Menolfi, Brian Lee, Hanwen Zhang, Wenxia Jiang, Nicole Bowen, Yunyue Wang, Junfei Zhao, Antony Holmes, Steven Gershik, Raul Rabadan, Baek Kim, Shan Zha .  2023.   ATR kinase supports normal proliferation in the early S phase by preventing replication resource exhaustion.. bioRxiv : the preprint server for biology. Go to Pubmed
Norio Miyamura, Kodai Suzuki, Richard Friedman, Aristidis Floratos, Yuki Kunisada, Kazuya Masuda, Andrew Lowy, Moriya Tsuji, Kazuki Sugahara .  2023.   A pancreatic cancer mouse model with human immunity.. bioRxiv : the preprint server for biology. Go to Pubmed
Norio Miyamura, Kodai Suzuki, Richard Friedman, Aristidis Floratos, Yuki Kunisada, Kazuya Masuda, Andrew Lowy, Moriya Tsuji, Kazuki Sugahara .  2023.   A pancreatic cancer mouse model with human immunity.. bioRxiv : the preprint server for biology. Go to Pubmed
Jie Ding, Sung-Jin Lee, Lukas Vlahos, Kanako Yuki, Cara Rada, Vincent van Unen, Meghah Vuppalapaty, Hui Chen, Asmiti Sura, Aaron McCormick, Madeline Tomaske, Samira Alwahabi, Huy Nguyen, William Nowatzke, Lily Kim, Lisa Kelly, Douglas Vollrath, Andrea Califano, Wen-Chen Yeh, Yang Li, Calvin Kuo .  2023.   Therapeutic blood-brain barrier modulation and stroke treatment by a bioengineered FZD-selective WNT surrogate in mice.. Nature communications. 14 (1) :2947 Go to Pubmed
Michael Honigberg, Buu Truong, Raiyan Khan, Brenda Xiao, Laxmi Bhatta, Ha Vy, Rafael Guerrero, Art Schuermans, Margaret Selvaraj, Aniruddh Patel, Satoshi Koyama, So Cho, Shamsudheen Vellarikkal, Mark Trinder, Sarah Urbut, Kathryn Gray, Ben Brumpton, Snehal Patil, Sebastian Zöllner, Mariah Antopia, Richa Saxena, Girish Nadkarni, Ron Do, Qi Yan, Itsik Pe'er, Shefali Verma, Rajat Gupta, David Haas, Hilary Martin, David van Heel, Triin Laisk, Pradeep Natarajan .  2023.   Polygenic prediction of preeclampsia and gestational hypertension.. Nature medicine. Go to Pubmed
Celine Schreidah, George Reynolds, Lauren Fahmy, Richard Carvajal, Maarten Vermeer, Sean Whittaker, Itsik Pe'er, Larisa Geskin .  2023.   Scoping review of genetic databases for rare dermatologic diseases: Opportunity for artificial intelligence and machine learning.. JAAD international. 12 :24-31 Go to Pubmed
Somnath Tagore, Samuel Tsang, Gordon Mills, Andrea Califano .  2023.   Systematic Pan-cancer Functional Inference and Validation of Hyper, Hypo and Neomorphic Mutations.. bioRxiv : the preprint server for biology. Go to Pubmed
Min Jang, Parth Patel, Alexandre Pereira, Jon Willcox, Alireza Haghighi, Angela Tai, Kaoru Ito, Sarah Morton, Joshua Gorham, David McKean, Steven DePalma, Daniel Bernstein, Martina Brueckner, Wendy Chung, Alessandro Giardini, Elizabeth Goldmuntz, Jonathan Kaltman, Richard Kim, Jane Newburger, Yufeng Shen, Deepak Srivastava, Martin Tristani-Firouzi, Bruce Gelb, George Porter, Christine Seidman, Jonathan Seidman .  2023.   Contribution of Previously Unrecognized RNA Splice-Altering Variants to Congenital Heart Disease.. Circulation. Genomic and precision medicine. :e003924 Go to Pubmed
Luz Zapater, Elias Rodriguez-Fos, Merce Planas-Felix, Sara Lewis, Daniel Cameron, Phillip Demarest, Anika Nabila, Junfei Zhao, Paul Bergin, Casie Reed, Makiko Yamada, Alex Pagnozzi, Caroline Nava, Emilie Bourel-Ponchel, Derek Neilson, Ali Dursun, Köksal Özgül, Halil Akar, Nicholas Socci, Matthew Hayes, Raul Rabadan, David Torrents, Michael Kruer, Miklos Toth, Alex Kentsis .  2023.   A transposase-derived gene required for human brain development.. bioRxiv : the preprint server for biology. Go to Pubmed
Alistair Dunham, Pedro Beltrao, Mohammed AlQuraishi .  2023.   High-throughput deep learning variant effect prediction with Sequence UNET.. Genome biology. 24 (1) :110 Go to Pubmed
Lara Tshering, Fu Luo, Savanah Russ, Mariola Szenk, Diana Rubel, Karis Tutuska, James Rail, Gábor Balázsi, Michael Shen, Flaminia Talos .  2023.   Immune mechanisms shape the clonal landscape during early progression of prostate cancer.. Developmental cell. Go to Pubmed
Aleksandar Obradovic, Casey Ager, Mikko Turunen, Thomas Nirschl, Mohsen Khosravi-Maharlooei, Alina Iuga, Christopher Jackson, Srinivasan Yegnasubramanian, Lorenzo Tomassoni, Ester Fernandez, Patrick McCann, Meri Rogava, Angelo DeMarzo, Christina Kochel, Mohamad Allaf, Trinity Bivalacqua, Michael Lim, Ronald Realubit, Charles Karan, Charles Drake, Andrea Califano .  2023.   Systematic elucidation and pharmacological targeting of tumor-infiltrating regulatory T cell master regulators.. Cancer cell. 41 (5) :933-949.e11 Go to Pubmed
Yun Lin, Daniel Mallia, Andrea Clark-Sevilla, Adam Catto, Alisa Leshchenko, Qi Yan, David Haas, Ronald Wapner, Itsik Pe'er, Anita Raja, Ansaf Salleb-Aouissi .  2023.   A Comprehensive and Bias-Free Machine Learning Approach for Risk Prediction of Preeclampsia with Severe Features in a Nulliparous Study Cohort.. Research square. Go to Pubmed
Elphège Nora, Stein Aerts, Patricia Wittkopp, Harmen Bussemaker, Martha Bulyk, Saurabh Sinha, Julia Zeitlinger, Justin Crocker, Juan Bass .  2023.   Emerging questions in transcriptional regulation.. Cell systems. 14 (4) :247-251 Go to Pubmed
Prabhjot Mundi, Filemon Cruz, Adina Grunn, Daniel Diolaiti, Audrey Mauguen, Allison Rainey, Kristina Guillan, Armaan Siddiquee, Daoqi You, Ronald Realubit, Charles Karan, Michael Ortiz V, Eugene Douglass, Melissa Accordino, Suzanne Mistretta, Frances Brogan, Jeffrey Bruce, Cristina Caescu, Richard Carvajal, Katherine Crew, Guarionex Decastro, Mark Heaney, Brian Henick, Dawn Hershman, June Hou, Fabio Iwamoto, Joseph Jurcic, Ravi Kiran, Michael Kluger, Teri Kreisl, Nicole Lamanna, Andrew Lassman, Emerson Lim, Gulam Manji, Guy McKhann, James McKiernan, Alfred Neugut, Kenneth Olive, Todd Rosenblat, Gary Schwartz, Catherine Shu, Michael Sisti, Ana Tergas, Reena Vattakalam, Mary Welch, Sven Wenske, Jason Wright, Peter Canoll, Hanina Hibshoosh, Kevin Kalinsky, Mahalaxmi Aburi, Peter Sims, Mariano Alvarez, Andrew Kung, Andrea Califano .  2023.   A Transcriptome-Based Precision Oncology Platform for Patient-Therapy Alignment in a Diverse Set of Treatment-Resistant Malignancies.. Cancer discovery. 13 (6) :1386-1407 Go to Pubmed
Jennifer Zagelbaum, Allana Schooley, Junfei Zhao, Benjamin Schrank, Elsa Callen, Shan Zha, Max Gottesman, André Nussenzweig, Raul Rabadan, Job Dekker, Jean Gautier .  2023.   Author Correction: Multiscale reorganization of the genome following DNA damage facilitates chromosome translocations via nuclear actin polymerization.. Nature structural & molecular biology. Go to Pubmed
Yufeng Shen, Qingming Tang, Jiajia Wang, Zheng Zhou, Ying Yin, Yifan Zhang, Wenhao Zheng, Xinyuan Wang, Guangjin Chen, Jiwei Sun, Lili Chen .  2023.   Targeting RORα in macrophages to boost diabetic bone regeneration.. Cell proliferation. :e13474 Go to Pubmed
Sara Viragova, Luis Aparicio, Pierangela Palmerini, Junfei Zhao, Luis Salazar, Alexandra Schurer, Anika Dhuri, Debashis Sahoo, Christopher Moskaluk, Raul Rabadan, Piero Dalerba .  2023.   Inverse agonists of RAR/RXR signaling as lineage-specific anti-tumor agents against human Adenoid Cystic Carcinoma.. Journal of the National Cancer Institute. Go to Pubmed
Hubert Pakula, Mohamed Omar, Ryan Carelli, Filippo Pederzoli, Giuseppe Fanelli, Tania Pannellini, Lucie Van Emmenis, Silvia Rodrigues, Caroline Fidalgo-Ribeiro, Pier Nuzzo V, Nicholas Brady, Madhavi Jere, Caitlin Unkenholz, Mohammad Alexanderani, Francesca Khani, Francisca de Almeida, Cory Abate-Shen, Matthew Greenblatt, David Rickman, Christopher Barbieri, Brian Robinson, Luigi Marchionni, Massimo Loda .  2023.   Distinct mesenchymal cell states mediate prostate cancer progression.. bioRxiv : the preprint server for biology. Go to Pubmed
Guangjin Chen, Qingming Tang, Shaoling Yu, Yufeng Shen, Jiwei Sun, Jinfeng Peng, Ying Yin, Guangxia Feng, Xiaofeng Lu, Gang Mei, Yifan Zhang, Qian Wan, Luoying Zhang, Lili Chen .  2023.   Developmental growth plate cartilage formation suppressed by artificial light at night via inhibiting BMAL1-driven collagen hydroxylation.. Cell death and differentiation. 30 (6) :1503-1516 Go to Pubmed
Arvind Ravi, Matthew Hellmann, Monica Arniella, Mark Holton, Samuel Freeman, Vivek Naranbhai, Chip Stewart, Ignaty Leshchiner, Jaegil Kim, Yo Akiyama, Aaron Griffin, Natalie Vokes, Mustafa Sakhi, Vashine Kamesan, Hira Rizvi, Biagio Ricciuti, Patrick Forde, Valsamo Anagnostou, Jonathan Riess, Don Gibbons, Nathan Pennell, Vamsidhar Velcheti, Subba Digumarthy, Mari Mino-Kenudson, Andrea Califano, John Heymach V, Roy Herbst, Julie Brahmer, Kurt Schalper, Victor Velculescu, Brian Henick, Naiyer Rizvi, Pasi Jänne, Mark Awad, Andrew Chow, Benjamin Greenbaum, Marta Luksza, Alice Shaw, Jedd Wolchok, Nir Hacohen, Gad Getz, Justin Gainor .  2023.   Genomic and transcriptomic analysis of checkpoint blockade response in advanced non-small cell lung cancer.. Nature genetics. 55 (5) :807-819 Go to Pubmed
Tomasz Owczarek, Takashi Kobayashi, Ricardo Ramirez, Lijie Rong, Anna Puzio-Kuter, Gopa Iyer, Min Teo, Francisco Sanchez-Vega, Jingqiang Wang, Nikolaus Schultz, Tian Zheng, David Solit, Hikmat Al-Ahmadie, Cory Abate-Shen .  2023.   Correction: ARF Confers a Context-Dependent Response to Chemotherapy in Muscle-Invasive Bladder Cancer.. Cancer research. 83 (7) :1159 Go to Pubmed
Nicola Floc'h, Carolyn Kinkade, Takashi Kobayashi, Alvaro Aytes, Celine Lefebvre, Antonina Mitrofanova, Robert Cardiff, Andrea Califano, Michael Shen, Cory Abate-Shen .  2023.   Editor's Note: Dual Targeting of the Akt/mTOR Signaling Pathway Inhibits Castration-Resistant Prostate Cancer in a Genetically Engineered Mouse Model.. Cancer research. 83 (7) :1160 Go to Pubmed
Xuesong Ouyang, Walter Jessen, Hikmat Al-Ahmadie, Angel Serio, Yong Lin, Weichung-Joseph Shih, Victor Reuter, Peter Scardino, Michael Shen, Bruce Aronow, Andrew Vickers, William Gerald, Cory Abate-Shen .  2023.   Editor's Note: Activator Protein-1 Transcription Factors Are Associated with Progression and Recurrence of Prostate Cancer.. Cancer research. 83 (7) :1161 Go to Pubmed
Vincent FitzPatrick, Christ Leemans, Joris van Arensbergen, Bas van Steensel, Harmen Bussemaker .  2023.   Defining the fine structure of promoter activity on a genome-wide scale with CISSECTOR.. Nucleic acids research. Go to Pubmed
Carlo Maurer, Alvaro Curiel-Garcia, Sam Holmstrom, Pasquale Laise, Carmine Palermo, Steven Sastra, Anthony Andren, Zhang Li, Tessa LeLarge, Irina Sagalovskiy, Daniel Ross, Vilma Rosario, Kate Lu, Ethan Ferraiuolo, Nicholas Spinosa, Winston Wong, Kaitlin Shaw, John Chabot, Jeanine Genkinger, Hanina Hibshoosh, Gulam Manji, Alina Iuga, Roland Schmid, Michael Badgley, Kristen Johnson, Andrea Califano, Costas Lyssiotis, Kenneth Olive .  2023.   Ras-dependent activation of BMAL2 regulates hypoxic metabolism in pancreatic cancer.. bioRxiv : the preprint server for biology. Go to Pubmed
Aaron Griffin, Lukas Vlahos, Codruta Chiuzan, Andrea Califano .  2023.   NaRnEA: An Information Theoretic Framework for Gene Set Analysis.. Entropy (Basel, Switzerland). 25 (3) Go to Pubmed
Sitara Persad, Zi-Ning Choo, Christine Dien, Noor Sohail, Ignas Masilionis, Ronan Chaligne, Tal Nawy, Chrysothemis Brown, Roshan Sharma, Itsik Pe'er, Manu Setty, Dana Pe'er .  2023.   SEACells infers transcriptional and epigenomic cellular states from single-cell genomics data.. Nature biotechnology. Go to Pubmed
Christina Guo, Ines Figueiredo, Bora Gurel, Antje Neeb, George Seed, Mateus Crespo, Suzanne Carreira, Jan Rekowski, Lorenzo Buroni, Jon Welti, Denisa Bogdan, Lewis Gallagher, Adam Sharp, Maria de la Maza, Pasquale Rescigno, Daniel Westaby, Khobe Chandran, Ruth Riisnaes, Ana Ferreira, Susana Miranda, Bianca Calì, Andrea Alimonti, Silvia Bressan, Alana Nguyen, Michael Shen, Jessica Hawley, Aleksandar Obradovic, Charles Drake, Claudia Bertan, Chloe Baker, Nina Tunariu, Wei Yuan, Johann de Bono .  2023.   Erratum to "B7-H3 as a Therapeutic Target in Advanced Prostate Cancer" [Eur Urol 2023;83(3):224-38].. European urology. 83 (6) :e168-e169 Go to Pubmed
Balaji Santhanam, Panos Oikonomou, Saeed Tavazoie .  2023.   Systematic assessment of prognostic molecular features across cancers.. Cell genomics. 3 (3) :100262 Go to Pubmed
Crismita Dmello, Junfei Zhao, Li Chen, Andrew Gould, Brandyn Castro, Víctor Arrieta, Daniel Zhang, Kwang-Soo Kim, Deepak Kanojia, Peng Zhang, Jason Miska, Ragini Yeeravalli, Karl Habashy, Ruth Saganty, Seong Kang, Jawad Fares, Connor Liu, Gavin Dunn, Elizabeth Bartom, Matthew Schipma, Patrick Hsu, Mahmoud Alghamri, Maciej Lesniak, Amy Heimberger, Raul Rabadan, Catalina Lee-Chang, Adam Sonabend .  2023.   Checkpoint kinase 1/2 inhibition potentiates anti-tumoral immune response and sensitizes gliomas to immune checkpoint blockade.. Nature communications. 14 (1) :1566 Go to Pubmed
Jason Kirk, Jie Wang, Amanda Tracz, Mark Long, Spencer Rosario, Yibing Ji, Rahul Kumar, Xiaozhuo Liu, Prashant Singh, Igor Puzanov, Gurkamal Chatta, Qing Cheng, Jiaoti Huang, Jeffrey Wrana, Jonathan Lovell, Han Yu, Song Liu, Michael Shen, Tao Liu, Dean Tang .  2023.   Integrated single-cell analysis defines the epigenetic basis of castration-resistant prostate luminal cells.. bioRxiv : the preprint server for biology. Go to Pubmed
Donald Petrey, Haiqing Zhao, Stephen Trudeau, Diana Murray, Barry Honig .  2023.   PrePPI: A Structure Informed Proteome-wide Database of Protein-Protein Interactions.. Journal of molecular biology. :168052 Go to Pubmed
George Austin, Heekuk Park, Yoli Meydan, Dwayne Seeram, Tanya Sezin, Yue Lou, Brian Firek, Michael Morowitz, Jillian Banfield, Angela Christiano, Itsik Pe'er, Anne-Catrin Uhlemann, Liat Shenhav, Tal Korem .  2023.   Contamination source modeling with SCRuB improves cancer phenotype prediction from microbiome data.. Nature biotechnology. Go to Pubmed
Donald Petrey, Haiqing Zhao, Stephen Trudeau, Diana Murray, Barry Honig .  2023.   PrePPI: A structure informed proteome-wide database of protein-protein interactions.. bioRxiv : the preprint server for biology. Go to Pubmed
Francisco Jurado-Rueda, Lola Alonso-Guirado, Tomin Perea-Cham-Blee, Oliver Elliott, Ioan Filip, Raul Rabadan, Núria Malats .  2023.   Benchmarking of microbiome detection tools on RNA-seq synthetic databases according to diverse conditions.. Bioinformatics advances. 3 (1) :vbad014 Go to Pubmed
Matthew Lewis, Alexander Hsieh, Lu Qiao, Renjie Tan, Brigitte Kazzi, Alexandra Channing, Emily Griffin, Vaidehi Jobanputra, Jennifer Su, Chowdhury Shahryar, Lazaros Kochilas, William Gaynor, Teresa Lee, Elizabeth Goldmuntz, Mark Russell, Seema Mital, Martin Tristani, Martina Brueckner, Jane Newburger, Yufeng Shen, Wendy Chung .  2023.   Association of Predicted Damaging De Novo Variants on Ventricular Function in Individuals With Congenital Heart Disease.. Circulation. Genomic and precision medicine. 16 (2) :e003900 Go to Pubmed
Na Zhu, Charles Leduc, Ilene Fennoy, Blandine Re, Claudia Doege, Yufeng Shen, Wendy Chung, Rudolph Leibel .  2023.   Predicted loss of function alleles in Bassoon (BSN) are associated with obesity.. medRxiv : the preprint server for health sciences. Go to Pubmed
George Rosenberger, Wenxue Li, Mikko Turunen, Jing He, Prem Subramaniam, Sergey Pampou, Aaron Griffin, Charles Karan, Patrick Kerwin, Diana Murray, Barry Honig, Yansheng Liu, Andrea Califano .  2023.   Network-based elucidation of colon cancer drug resistance by phosphoproteomic time-series analysis.. bioRxiv : the preprint server for biology. Go to Pubmed
Karen Gomez, Gianluca Schiavoni, Yoonhee Nam, Jean-Baptiste Reynier, Cole Khamnei, Michael Aitken, Giuseppe Palmieri, Antonio Cossu, Arnold Levine, Carel van Noesel, Brunangelo Falini, Laura Pasqualucci, Enrico Tiacci, Raul Rabadan .  2023.   Genomic landscape of virus-associated cancers.. medRxiv : the preprint server for health sciences. Go to Pubmed
Mai Sato, Rowyn Liebau, Zhaoqi Liu, Lizhi Liu, Raul Rabadan, Jean Gautier .  2023.   Correction: The UVSSA complex alleviates MYC-driven transcription stress.. The Journal of cell biology. 222 (3) Go to Pubmed
Emily Griffin, Shannon Nees, Sarah Morton, Julia Wynn, Nihir Patel, Vaidehi Jobanputra, Scott Robinson, Stephanie Kochav, Alice Tao, Carli Andrews, Nancy Cross, Judith Geva, Kristen Lanzilotta, Alyssa Ritter, Eileen Taillie, Alexandra Thompson, Chris Meyer, Rachel Akers, Eileen King, James Cnota, Richard Kim, George Porter, Martina Brueckner, Christine Seidman, Yufeng Shen, Bruce Gelb, Elizabeth Goldmuntz, Jane Newburger, Amy Roberts, Wendy Chung .  2023.   Evidence-Based Assessment of Congenital Heart Disease Genes to Enable Returning Results in a Genomic Study.. Circulation. Genomic and precision medicine. 16 (2) :e003791 Go to Pubmed
Nazim Bouatta, Mohammed AlQuraishi .  2023.   Structural biology at the scale of proteomes.. Nature structural & molecular biology. 30 (2) :129-130 Go to Pubmed
Stephen Trudeau, Howook Hwang, Deepika Mathur, Kamrun Begum, Donald Petrey, Diana Murray, Barry Honig .  2023.   PrePCI: A structure- and chemical similarity-informed database of predicted protein compound interactions.. Protein science : a publication of the Protein Society. 32 (4) :e4594 Go to Pubmed
Ioan Filip, Anqi Wang, Oleksandr Kravets, Rose Orenbuch, Junfei Zhao, Tomin Perea-Chamblee, Gulam Manji, Evangelina de Maturana, Núria Malats, Kenneth Olive, Raul Rabadan .  2023.   Pervasiveness of HLA allele-specific expression loss across tumor types.. Genome medicine. 15 (1) :8 Go to Pubmed
Jingqiu Liao, Liat Shenhav, Myrna Serrano, Bin Zhu, Gregory Buck, Tal Korem .  2023.   Microdiversity of the Vaginal Microbiome is Associated with Preterm Birth.. bioRxiv : the preprint server for biology. Go to Pubmed
Dennis Hsu, Jenny Gao, Norihiro Yamaguchi, Alexandra Pinzaru, Nandan Mandayam, Maria Liberti, Søren Heissel, Hanan Alwaseem, Saeed Tavazoie, Sohail Tavazoie .  2023.   Arginine limitation causes a directed DNA sequence evolution response in colorectal cancer cells.. bioRxiv : the preprint server for biology. Go to Pubmed
Maya Poon, Daniel Caron, Zicheng Wang, Steven Wells, David Chen, Wenzhao Meng, Peter Szabo, Nora Lam, Masaru Kubota, Rei Matsumoto, Adeeb Rahman, Eline Prak, Yufeng Shen, Peter Sims, Donna Farber .  2023.   Tissue adaptation and clonal segregation of human memory T cells in barrier sites.. Nature immunology. 24 (2) :309-319 Go to Pubmed
William Kindschuh, Federico Baldini, Martin Liu, Jingqiu Liao, Yoli Meydan, Harry Lee, Almut Heinken, Ines Thiele, Christoph Thaiss, Maayan Levy, Tal Korem .  2023.   Preterm birth is associated with xenobiotics and predicted by the vaginal metabolome.. Nature microbiology. 8 (2) :246-259 Go to Pubmed
Gabriel Sturm, Kalpita Karan, Anna Monzel, Balaji Santhanam, Tanja Taivassalo, Céline Bris, Sarah Ware, Marissa Cross, Atif Towheed, Albert Higgins-Chen, Meagan McManus, Andres Cardenas, Jue Lin, Elissa Epel, Shamima Rahman, John Vissing, Bruno Grassi, Morgan Levine, Steve Horvath, Ronald Haller, Guy Lenaers, Douglas Wallace, Marie-Pierre St-Onge, Saeed Tavazoie, Vincent Procaccio, Brett Kaufman, Erin Seifert, Michio Hirano, Martin Picard .  2023.   OxPhos defects cause hypermetabolism and reduce lifespan in cells and in patients with mitochondrial diseases.. Communications biology. 6 (1) :22 Go to Pubmed
Dennis Hsu, Jenny Gao, Norihiro Yamaguchi, Alexandra Pinzaru, Qiushuang Wu, Nandan Mandayam, Maria Liberti, Søren Heissel, Hanan Alwaseem, Saeed Tavazoie, Sohail Tavazoie .  2023.   Arginine limitation drives a directed codon-dependent DNA sequence evolution response in colorectal cancer cells.. Science advances. 9 (1) :eade9120 Go to Pubmed
Yufeng Shen, Huiliang Geng, Feifang Zhang, Zongying Li, Bingcheng Yang .  2023.   A polyethyleneimine-functionalized polymer substrate polar stationary phase.. Journal of chromatography. A. 1689 :463711 Go to Pubmed
Tizita Zeleke, Qingfei Pan, Codruta Chiuzan, Maika Onishi, Yuxin Li, Haiyan Tan, Mariano Alvarez, Erin Honan, Min Yang, Pei Chia, Partha Mukhopadhyay, Sean Kelly, Ruby Wu, Kathleen Fenn, Meghna Trivedi, Melissa Accordino, Katherine Crew, Dawn Hershman, Matthew Maurer, Simon Jones, Anthony High, Junmin Peng, Andrea Califano, Kevin Kalinsky, Jiyang Yu, Jose Silva .  2023.   Network-based assessment of HDAC6 activity predicts preclinical and clinical responses to the HDAC6 inhibitor ricolinostat in breast cancer.. Nature cancer. 4 (2) :257-275 Go to Pubmed
Xiao Fan, Hongbing Pan, Alan Tian, Wendy Chung, Yufeng Shen .  2023.   SHINE: protein language model-based pathogenicity prediction for short inframe insertion and deletion variants.. Briefings in bioinformatics. 24 (1) Go to Pubmed
Jennifer Zagelbaum, Allana Schooley, Junfei Zhao, Benjamin Schrank, Elsa Callen, Shan Zha, Max Gottesman, André Nussenzweig, Raul Rabadan, Job Dekker, Jean Gautier .  2023.   Multiscale reorganization of the genome following DNA damage facilitates chromosome translocations via nuclear actin polymerization.. Nature structural & molecular biology. 30 (1) :99-106 Go to Pubmed
Jiwei Sun, Tiantian Chen, Baoying Zhao, Wenjie Fan, Yufeng Shen, Haojie Wei, Man Zhang, Wenhao Zheng, Jinfeng Peng, Jinyu Wang, Yifan Wang, Lihong Fan, Yingying Chu, Lili Chen, Cheng Yang .  2023.   Acceleration of Oral Wound Healing under Diabetes Mellitus Conditions Using Bioadhesive Hydrogel.. ACS applied materials & interfaces. 15 (1) :416-431 Go to Pubmed
Alessandro Vasciaveo, Juan Arriaga, Francisca de Almeida, Min Zou, Eugene Douglass, Florencia Picech, Maho Shibata, Antonio Rodriguez-Calero, Simone de Brot, Antonina Mitrofanova, Chee Chua, Charles Karan, Ronald Realubit, Sergey Pampou, Jaime Kim, Stephanie Afari, Timur Mukhammadov, Luca Zanella, Eva Corey, Mariano Alvarez, Mark Rubin, Michael Shen, Andrea Califano, Cory Abate-Shen .  2023.   OncoLoop: A Network-Based Precision Cancer Medicine Framework.. Cancer discovery. 13 (2) :386-409 Go to Pubmed
Kenneth Smith, Daniel Chawla, Bhavjinder Dhillon, Zhou Ji, Randi Vita, Eva van der Leest, Jing Weng, Ernest Tang, Amani Abid, Human Consortium, Bjoern Peters, Robert Hancock, Aris Floratos, Steven Kleinstein .  2022.   A curated collection of human vaccination response signatures.. Scientific data. 9 (1) :678 Go to Pubmed
Miguel Verbitsky, Sarathbabu Krishnamurthy, Priya Krithivasan, Daniel Hughes, Atlas Khan, Maddalena Marasà, Natalie Vena, Pavan Khosla, Junying Zhang, Tze Lim, Joseph Glessner, Chunhua Weng, Ning Shang, Yufeng Shen, George Hripcsak, Hakon Hakonarson, Iuliana Ionita-Laza, Brynn Levy, Eimear Kenny, Ruth Loos, Krzysztof Kiryluk, Simone Sanna-Cherchi, David Crosslin, Susan Furth, Bradley Warady, Robert Igo, Sudha Iyengar, Craig Wong, Afshin Parsa, Harold Feldman, Ali Gharavi .  2023.   Genomic Disorders in CKD across the Lifespan.. Journal of the American Society of Nephrology : JASN. 34 (4) :607-618 Go to Pubmed
Joann Diray-Arce, Helen Miller, Evan Henrich, Bram Gerritsen, Matthew Mulè, Slim Fourati, Jeremy Gygi, Thomas Hagan, Lewis Tomalin, Dmitry Rychkov, Dmitri Kazmin, Daniel Chawla, Hailong Meng, Patrick Dunn, John Campbell, Human Consortium, Minnie Sarwal, John Tsang, Ofer Levy, Bali Pulendran, Rafick Sekaly, Aris Floratos, Raphael Gottardo, Steven Kleinstein, Mayte Suárez-Fariñas .  2022.   The Immune Signatures data resource, a compendium of systems vaccinology datasets.. Scientific data. 9 (1) :635 Go to Pubmed
Ratul Chowdhury, Nazim Bouatta, Surojit Biswas, Christina Floristean, Anant Kharkar, Koushik Roy, Charlotte Rochereau, Gustaf Ahdritz, Joanna Zhang, George Church, Peter Sorger, Mohammed AlQuraishi .  2022.   Publisher Correction: Single-sequence protein structure prediction using a language model and deep learning.. Nature biotechnology. 40 (11) :1692 Go to Pubmed
Diego Coutinho, Prabhjot Mundi, Lianna Marks, Chelsey Burke, Michael Ortiz V, Daniel Diolaiti, Lauren Bird, Kelly Vallance, Glorymar Ibáñez, Daoqi You, Matthew Long, Nestor Rosales, Adina Grunn, Andoyo Ndengu, Armaan Siddiquee, Ervin Gaviria, Allison Rainey, Ladan Fazlollahi, Hajime Hosoi, Andrea Califano, Andrew Kung, Filemon Cruz .  2022.   Validation of a non-oncogene encoded vulnerability to exportin 1 inhibition in pediatric renal tumors.. Med (New York, N.Y.). 3 (11) :774-791.e7 Go to Pubmed
Ratul Chowdhury, Nazim Bouatta, Surojit Biswas, Christina Floristean, Anant Kharkar, Koushik Roy, Charlotte Rochereau, Gustaf Ahdritz, Joanna Zhang, George Church, Peter Sorger, Mohammed AlQuraishi .  2022.   Single-sequence protein structure prediction using a language model and deep learning.. Nat Biotechnol. 40 (11) :1617-1623 Go to Pubmed
Wei Zhong, Liping Chen, Xiaopan Li, Yichen Chen, Yao Zhang, Canjie Guo, Yufeng Shen, Huimin Chen .  2022.   Disability-adjusted life years and the trends of the burden of colorectal cancer: a population-based study in Shanghai, China during 2002 to 2016.. Chinese medical journal. 135 (24) :2950-2955 Go to Pubmed
Yizhuo Zhou, Ying Yang, Lihao Guo, Jun Qian, Jian Ge, Debora Sinner, Hongxu Ding, Andrea Califano, Wellington Cardoso V .  2022.   Airway basal cells show regionally distinct potential to undergo metaplastic differentiation.. eLife. 11 Go to Pubmed
Christina Guo, Ines Figueiredo, Bora Gurel, Antje Neeb, George Seed, Mateus Crespo, Suzanne Carreira, Jan Rekowski, Lorenzo Buroni, Jon Welti, Denisa Bogdan, Lewis Gallagher, Adam Sharp, Maria de la Maza, Pasquale Rescigno, Daniel Westaby, Khobe Chandran, Ruth Riisnaes, Ana Ferreira, Susana Miranda, Bianca Calì, Andrea Alimonti, Silvia Bressan, Alana Nguyen, Michael Shen, Jessica Hawley, Aleksandar Obradovic, Charles Drake, Claudia Bertan, Chloe Baker, Nina Tunariu, Wei Yuan, Johann de Bono .  2022.   B7-H3 as a Therapeutic Target in Advanced Prostate Cancer.. European urology. Go to Pubmed
Christina Guo, Ines Figueiredo, Bora Gurel, Antje Neeb, George Seed, Mateus Crespo, Suzanne Carreira, Jan Rekowski, Lorenzo Buroni, Jon Welti, Denisa Bogdan, Lewis Gallagher, Adam Sharp, Maria de la Maza, Pasquale Rescigno, Daniel Westaby, Khobe Chandran, Ruth Riisnaes, Ana Ferreira, Susana Miranda, Bianca Calì, Andrea Alimonti, Silvia Bressan, Alana Nguyen, Michael Shen, Jessica Hawley, Aleksandar Obradovic, Charles Drake, Claudia Bertan, Chloe Baker, Nina Tunariu, Wei Yuan, Johann de Bono .  2023.   B7-H3 as a Therapeutic Target in Advanced Prostate Cancer.. European urology. 83 (3) :224-238 Go to Pubmed
Nadir Boni, Lawrence Shapiro, Barry Honig, Yinghao Wu, Rotem Rubinstein .  2022.   On the formation of ordered protein assemblies in cell-cell interfaces.. Proc Natl Acad Sci U S A. 119 (34) :e2206175119 Go to Pubmed
Guojie Zhong, Yufeng Shen .  2022.   Statistical models of the genetic etiology of congenital heart disease.. Current opinion in genetics & development. 76 :101967 Go to Pubmed
Corinne Lutomski, Tarick El-Baba, Carol Robinson V, Roland Riek, Sjors Scheres, Nieng Yan, Mohammed AlQuraishi, Lu Gan .  2022.   The next decade of protein structure.. Cell. 185 (15) :2617-2620 Go to Pubmed
Pasquale Laise, Megan Stanifer, Gideon Bosker, Xiaoyun Sun, Sergio Triana, Patricio Doldan, Federico La Manna, Marta De Menna, Ronald Realubit, Sergey Pampou, Charles Karan, Theodore Alexandrov, Marianna de Julio, Andrea Califano, Steeve Boulant, Mariano Alvarez .  2022.   A model for network-based identification and pharmacological targeting of aberrant, replication-permissive transcriptional programs induced by viral infection.. Commun Biol. 5 (1) :714 Go to Pubmed
Siqian Feng, Chaitanya Rastogi, Ryan Loker, William Glassford, Tomas Rube, Harmen Bussemaker, Richard Mann .  2022.   Transcription factor paralogs orchestrate alternative gene regulatory networks by context-dependent cooperation with multiple cofactors.. Nat Commun. 13 (1) :3808 Go to Pubmed
Amy Lipman, Xiao Fan, Yufeng Shen, Wendy Chung .  2022.   Clinical and genetic characterization of CACNA1A-related disease.. Clin Genet. 102 (4) :288-295 Go to Pubmed
Amy Lipman, Xiao Fan, Yufeng Shen, Wendy Chung .  2022.   Clinical and genetic characterization of CACNA1A-related disease.. Clinical genetics. 102 (4) :288-295 Go to Pubmed
Parvathi Myer, Hyunjin Kim, Anna Blümel, Ellen Finnegan, Alexander Kel, Taylor Thompson V, John Greally, Jochen Prehn, Darran O'Connor, Richard Friedman, Aris Floratos, Sudipto Das .  2022.   Master Transcription Regulators and Transcription Factors Regulate Immune-Associated Differences Between Patients of African and European Ancestry With Colorectal Cancer.. Gastro hep advances. 1 (3) :328-341 Go to Pubmed
Jiwei Sun, Fengyuan Guo, Qingming Tang, Guangjin Chen, Jinfeng Peng, Yufeng Shen, Junyuan Zhang, Jingqiong Hu, Cheng Yang .  2022.   Identification of a novel immune gene panel in tongue squamous cell carcinoma.. American journal of translational research. 14 (5) :2801-2824 Go to Pubmed
Mohammed AlQuraishi, Samah Chahed, Dina Alani, Dexter Puckett, Presley Dowker, Katelin Hubbard, Yi Zhao, Ji Kim, Laurentia Nodit, Huma Fatima, Dallas Donohoe, Brynn Voy, Winyoo Chowanadisai, Ahmed Bettaieb .  2022.   Podocyte specific deletion of PKM2 ameliorates LPS-induced podocyte injury through beta-catenin.. Cell Commun Signal. 20 (1) :76 Go to Pubmed
Tomas Rube, Chaitanya Rastogi, Siqian Feng, Judith Kribelbauer, Allyson Li, Basheer Becerra, Lucas Melo, Bach Do, Xiaoting Li, Hammaad Adam, Neel Shah, Richard Mann, Harmen Bussemaker .  2022.   Prediction of protein-ligand binding affinity from sequencing data with interpretable machine learning.. Nat Biotechnol. Go to Pubmed
Robyn Gartrell, Thomas Enzler, Pan Kim, Benjamin Fullerton, Ladan Fazlollahi, Andrew Chen, Hanna Minns, Subha Perni, Stuart Weisberg, Emanuelle Rizk, Samuel Wang, Eun Oh, Xinzheng Guo V, Codruta Chiuzan, Gulam Manji, Susan Bates, John Chabot, Beth Schrope, Michael Kluger, Jean Emond, Raul Rabadan, Donna Farber, Helen Remotti, David Horowitz, Yvonne Saenger .  2022.   Neoadjuvant chemoradiation alters the immune microenvironment in pancreatic ductal adenocarcinoma.. Oncoimmunology. 11 (1) :2066767 Go to Pubmed
Cory Abate-Shen, Francisca de Almeida .  2022.   Establishment of the LNCaP Cell Line - The Dawn of an Era for Prostate Cancer Research.. Cancer Res. 82 (9) :1689-1691 Go to Pubmed
Alexandros Papachristodoulou, Cory Abate-Shen .  2022.   Precision intervention for prostate cancer: Re-evaluating who is at risk.. Cancer Lett. 538 :215709 Go to Pubmed
Kacey Ronaldson-Bouchard, Diogo Teles, Keith Yeager, Daniel Tavakol, Yimu Zhao, Alan Chramiec, Somnath Tagore, Max Summers, Sophia Stylianos, Manuel Tamargo, Busub Lee, Susan Halligan, Erbil Abaci, Zongyou Guo, Joanna Jacków, Alberto Pappalardo, Jerry Shih, Rajesh Soni, Shivam Sonar, Carrie German, Angela Christiano, Andrea Califano, Karen Hirschi, Christopher Chen, Andrzej Przekwas, Gordana Vunjak-Novakovic .  2022.   A multi-organ chip with matured tissue niches linked by vascular flow.. Nature biomedical engineering. 6 (4) :351-371 Go to Pubmed
Jose Cortes, Ioan Filip, Robert Albero, Juan Patiño-Galindo, Aidan Quinn, Wen-Hsuan Lin, Anouchka Laurent, Bobby Shih, Jessie Brown, Anisha Cooke, Adam Mackey, Jonah Einson, Sakellarios Zairis, Alfredo Rivas-Delgado, Maria Laginestra, Stefano Pileri, Elias Campo, Govind Bhagat, Adolfo Ferrando, Raul Rabadan, Teresa Palomero .  2022.   Oncogenic Vav1-Myo1f induces therapeutically targetable macrophage-rich tumor microenvironment in peripheral T cell lymphoma.. Cell reports. 39 (3) :110695 Go to Pubmed
David Schoenfeld, Royce Zhou, Sakellarios Zairis, William Su, Nicole Steinbach, Deepti Mathur, Ankita Bansal, Alexis Zachem, Bertilia Tavarez, Dan Hasson, Emily Bernstein, Raul Rabadan, Ramon Parsons .  2022.   Loss of PBRM1 Alters Promoter Histone Modifications and Activates ALDH1A1 to Drive Renal Cell Carcinoma.. Mol Cancer Res. 20 (8) :1193-1207 Go to Pubmed
Shuwa Xu, Alina Sergeeva, Phinikoula Katsamba, Seetha Mannepalli, Fabiana Bahna, Jude Bimela, Lawrence Zipursky, Lawrence Shapiro, Barry Honig, Kai Zinn .  2022.   Affinity requirements for control of synaptic targeting and neuronal cell survival by heterophilic IgSF cell adhesion molecules.. Cell reports. 39 (1) :110618 Go to Pubmed
Moritz Middelhoff, Giovanni Valenti, Lorenzo Tomassoni, Yosuke Ochiai, Bryana Belin, Ryota Takahashi, Ermanno Malagola, Henrik Nienhüser, Michael Finlayson, Yoku Hayakawa, Leah Zamechek, Bernhard Renz, Benedikt Westphalen, Michael Quante, Kara Margolis, Peter Sims, Pasquale Laise, Andrea Califano, Meenakshi Rao, Michael Gershon, Timothy Wang .  2022.   Adult enteric Dclk1-positive glial and neuronal cells reveal distinct responses to acute intestinal injury.. Am J Physiol Gastrointest Liver Physiol. 322 (6) :G583-G597 Go to Pubmed
Aleksandar Obradovic, Diana Graves, Michael Korrer, Yu Wang, Sohini Roy, Abdullah Naveed, Yaomin Xu, Adam Luginbuhl, Joseph Curry, Michael Gibson, Kamran Idrees, Paula Hurley, Peng Jiang, Shirley Liu, Ravindra Uppaluri, Charles Drake, Andrea Califano, Young Kim .  2022.   Immunostimulatory Cancer-Associated Fibroblast Subpopulations Can Predict Immunotherapy Response in Head and Neck Cancer.. Clinical cancer research : an official journal of the American Association for Cancer Research. 28 (10) :2094-2109 Go to Pubmed
Aleksandar Obradovic, Diana Graves, Michael Korrer, Yu Wang, Sohini Roy, Abdullah Naveed, Yaomin Xu, Adam Luginbuhl, Joseph Curry, Michael Gibson, Kamran Idrees, Paula Hurley, Peng Jiang, Shirley Liu, Ravindra Uppaluri, Charles Drake, Andrea Califano, Young Kim .  2022.   Immunostimulatory Cancer-Associated Fibroblast Subpopulations Can Predict Immunotherapy Response in Head and Neck Cancer.. Clinical cancer research : an official journal of the American Association for Cancer Research. 28 (10) :2094-2109 Go to Pubmed
Aleksandar Obradovic, Diana Graves, Michael Korrer, Yu Wang, Sohini Roy, Abdullah Naveed, Yaomin Xu, Adam Luginbuhl, Joseph Curry, Michael Gibson, Kamran Idrees, Paula Hurley, Peng Jiang, Shirley Liu, Ravindra Uppaluri, Charles Drake, Andrea Califano, Young Kim .  2022.   Immunostimulatory Cancer-Associated Fibroblast Subpopulations Can Predict Immunotherapy Response in Head and Neck Cancer.. Clin Cancer Res. 28 (10) :2094-2109 Go to Pubmed
Francesco Cambuli, Veronica Foletto, Alessandro Alaimo, Dario De Felice, Francesco Gandolfi, Maria Palumbieri, Michela Zaffagni, Sacha Genovesi, Marco Lorenzoni, Martina Celotti, Emiliana Bertossio, Giosuè Mazzero, Arianna Bertossi, Alessandra Bisio, Francesco Berardinelli, Antonio Antoccia, Marco Gaspari, Mattia Barbareschi, Michelangelo Fiorentino, Michael Shen, Massimo Loda, Alessandro Romanel, Andrea Lunardi .  2022.   Intra-epithelial non-canonical Activin A signaling safeguards prostate progenitor quiescence.. EMBO Rep. 23 (5) :e54049 Go to Pubmed
Kerry Goodman, Phinikoula Katsamba, Rotem Rubinstein, Goran Ahlsen, Fabiana Bahna, Seetha Mannepalli, Hanbin Dan, Rosemary Sampogna V, Lawrence Shapiro, Barry Honig .  2022.   How clustered protocadherin binding specificity is tuned for neuronal self-/nonself-recognition.. eLife. 11 Go to Pubmed
Alberto Bartolomé, Nina Suda, Junjie Yu, Changyu Zhu, Jinsook Son, Hongxu Ding, Andrea Califano, Domenico Accili, Utpal Pajvani .  2022.   Notch-mediated Ephrin signaling disrupts islet architecture and β cell function.. JCI insight. 7 (6) Go to Pubmed
Víctor Arrieta, Andrew Chen, Robert Kane, Seong Kang, Cynthia Kassab, Crismita Dmello, Junfei Zhao, Kirsten Burdett, Pavan Upadhyayula, Catalina Lee-Chang, Joseph Shilati, Dinesh Jaishankar, Li Chen, Andrew Gould, Daniel Zhang, Jinzhou Yuan, Wenting Zhao, Xiaoyang Ling, Jared Burks, Brice Laffleur, Christina Amidei, Jeffrey Bruce, Rimas Lukas V, Jonathan Yamaguchi, David Cieremans, Gerson Rothschild, Uttiya Basu, Matthew McCord, Daniel Brat, Hui Zhang, Lee Cooper, Bin Zhang, Peter Sims, Tim Cloughesy, Robert Prins, Peter Canoll, Roger Stupp, Amy Heimberger, Craig Horbinski, Fabio Iwamoto, Raul Rabadan, Adam Sonabend .  2022.   Publisher Correction: ERK1/2 phosphorylation predicts survival following anti-PD-1 immunotherapy in recurrent glioblastoma.. Nature cancer. 3 (3) :373 Go to Pubmed
Pasquale Laise, Megan Stanifer, Gideon Bosker, Xiaoyun Sun, Sergio Triana, Patricio Doldan, Federico La Manna, Marta De Menna, Ronald Realubit, Sergey Pampou, Charles Karan, Theodore Alexandrov, Marianna de Julio, Andrea Califano, Steeve Boulant, Mariano Alvarez .  2022.   A Model for Network-Based Identification and Pharmacological Targeting of Aberrant, Replication-Permissive Transcriptional Programs Induced by Viral Infection.. Research square. Go to Pubmed
Zoila Lopez-Bujanda, Michael Haffner, Matthew Chaimowitz, Nivedita Chowdhury, Nicholas Venturini, Radhika Patel, Aleksandar Obradovic, Corey Hansen, Joanna Jacków, Janielle Maynard, Karen Sfanos, Cory Abate-Shen, Charles Bieberich, Paula Hurley, Mark Selby, Alan Korman, Angela Christiano, Angelo De Marzo, Charles Drake .  2021.   Castration-mediated IL-8 promotes myeloid infiltration and prostate cancer progression.. Nat Cancer. 2 (8) :803-818 Go to Pubmed
Víctor Arrieta, Andrew Chen, Robert Kane, Seong Kang, Cynthia Kassab, Crismita Dmello, Junfei Zhao, Kirsten Burdett, Pavan Upadhyayula, Catalina Lee-Chang, Joseph Shilati, Dinesh Jaishankar, Li Chen, Andrew Gould, Daniel Zhang, Jinzhou Yuan, Wenting Zhao, Xiaoyang Ling, Jared Burks, Brice Laffleur, Christina Amidei, Jeffrey Bruce, Rimas Lukas V, Jonathan Yamaguchi, David Cieremans, Gerson Rothschild, Uttiya Basu, Matthew McCord, Daniel Brat, Hui Zhang, Lee Cooper, Bin Zhang, Peter Sims, Tim Cloughesy, Robert Prins, Peter Canoll, Roger Stupp, Amy Heimberger, Craig Horbinski, Fabio Iwamoto, Raul Rabadan, Adam Sonabend .  2021.   ERK1/2 phosphorylation predicts survival following anti-PD-1 immunotherapy in recurrent glioblastoma.. Nat Cancer. 2 (12) :1372-1386 Go to Pubmed
Eugene Douglass, Robert Allaway, Bence Szalai, Wenyu Wang, Tingzhong Tian, Adrià Fernández-Torras, Ron Realubit, Charles Karan, Shuyu Zheng, Alberto Pessia, Ziaurrehman Tanoli, Mohieddin Jafari, Fangping Wan, Shuya Li, Yuanpeng Xiong, Miquel Duran-Frigola, Martino Bertoni, Pau Badia-I-Mompel, Lídia Mateo, Oriol Guitart-Pla, Verena Chung, DREAM Consortium, Jing Tang, Jianyang Zeng, Patrick Aloy, Julio Saez-Rodriguez, Justin Guinney, Daniela Gerhard, Andrea Califano .  2022.   A community challenge for a pancancer drug mechanism of action inference from perturbational profile data.. Cell reports. Medicine. 3 (1) :100492 Go to Pubmed
Elise Flynn, Athena Tsu, Silva Kasela, Sarah Kim-Hellmuth, François Aguet, Kristin Ardlie, Harmen Bussemaker, Pejman Mohammadi, Tuuli Lappalainen .  2022.   Transcription factor regulation of eQTL activity across individuals and tissues.. PLoS genetics. 18 (1) :e1009719 Go to Pubmed