DelPhi
Lead Investigator(s) Barry Honig
Provides numerical solutions to the Poisson-Boltzmann equation (both linear and nonlinear form) for molecules of arbitrary shape and charge distribution.
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JACKAL
Lead Investigator(s) Barry Honig
A collection of programs for the modeling and analysis of protein structures.
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Nest
Lead Investigator(s) Barry Honig
An algorithm for modeling protein structure based on a sequence-template alignment.
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PredUs
Lead Investigator(s) Barry Honig
A tool for the prediction of protein-protein interfaces based on interface conservation among structurally similar protein neighbors.
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SCREEN
Lead Investigator(s) Barry Honig
A tool for identifying protein cavities and computing cavity attributes that can be applied for classification and analysis.
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Ska
Lead Investigator(s) Barry Honig
A program to compare and align protein structures.
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SURFace
Lead Investigator(s) Barry Honig
Programs that calculate solvent accessible surface area and curvature-corrected solvent accessible surface area.
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