- All Software Types
- Reverse Engineering and Analysis of Regulatory Networks
- Protein/RNA Structure Prediction, Analysis, and Visualization
- Nucleic Acid and Protein Sequence Analysis and Annotation
- Gene Expression Data Analysis
- Genetic Data Analysis
- Computational Learning and Natural Language Processing
- Simulation
- Integration of Genomics Data
- Immuno-Genomics Data Analysis
- Protein Interaction Prediction
- Protein Structure Prediction and Analysis
- Other Tools
A bioinformatics resource designed to predict genes for orphan metabolic activities — known biochemical activities not currently assigned to genes in some or all organisms.
A software package for comprehensive and streamlined analysis of CLIP data, including peak calling and identification of precise protein-RNA crosslink sites.
A method to infer cancer somatic mutation hotspots.
A hidden Markov model (HMM)-based method for predicting clusters of RNA motif sites.
A method for assessing a quantitative measure of mRNA integrity directly from RNA-seq data.
A program for mapping RNA-seq reads, including de novo identification of exon junctions.
A pipeline for analyzing alternative splicing using RNA-seq data.
TOBI predicts somatic variants from .vcf or .bam input.