A bioinformatics resource designed to predict genes for orphan metabolic activities — known biochemical activities not currently assigned to genes in some or all organisms.

An algorithm for inferring gene regulatory networks from a set of microarray experiments.

Bioinformatics analysis of next-generation sequencing.

A network of protein-protein, protein-DNA, and modulatory interactions in human B cells.

Two R scripts for removing location biases from a multiwell dataset.

A method for calling copy number variants from exome sequencing data with an arbitrary number of reference samples.

A hidden Markov model for detecting copy number variants in exome sequence data.

A software package for comprehensive and streamlined analysis of CLIP data, including peak calling and identification of precise protein-RNA crosslink sites.

DASH (DASH Associates Shared Haplotypes) is a tool for detecting association to clusters of identity by descent (IBD) segments detected by the Germline software tool.

Provides numerical solutions to the Poisson-Boltzmann equation (both linear and nonlinear form) for molecules of arbitrary shape and charge distribution.

An efficient and accurate method for determining a drug's mechanism of action, including both direct drug targets and other gene products involved in implementing its effect or modulating its activity.

A Bioconductor package for identifying genetic variants that lie upstream of master regulators and drive cellular phenotypes.

A method to predict gene haploinsufficiency based on human epigenomic profiles under normal conditions.

A simulation framework for microbial populations in complex dynamic environments.