Search Publications
. 2015.
. 2015.
. 2015.
Quantitative modeling of transcription factor binding specificities using DNA shape..
Proc Natl Acad Sci U S A.
▶ Go to Pubmed
. 2015.
Improving microbial fitness in the mammalian gut by in vivo temporal functional metagenomics..
Mol Syst Biol.
11
(3)
:788
▶ Go to Pubmed
. 2015.
. 2015.
Transient pairing of homologous oct4 alleles accompanies the onset of embryonic stem cell differentiation..
Cell Stem Cell.
16
(3)
:275-88
▶ Go to Pubmed
. 2015.
. 2015.
. 2015.
. 2015.
Cell biology of mitotic recombination..
Cold Spring Harb Perspect Biol.
7
(3)
:a016535
▶ Go to Pubmed
. 2015.
. 2015.
. 2015.
Template-based prediction of protein function..
Curr Opin Struct Biol.
32C
:33-38
▶ Go to Pubmed
. 2015.
Systems pharmacology augments drug safety surveillance..
Clin Pharmacol Ther.
97
(2)
:151-8
▶ Go to Pubmed
. 2015.
A Targetable GATA2-IGF2 Axis Confers Aggressiveness in Lethal Prostate Cancer..
Cancer Cell.
27
(2)
:223-39
▶ Go to Pubmed
. 2015.
. 2015.
Highly multiplexed profiling of single-cell effector functions reveals deep functional heterogeneity in response to pathogenic ligands..
Proc Natl Acad Sci U S A.
112
(7)
:E607-15
▶ Go to Pubmed
. 2015.
Tissue-specific effects of genetic and epigenetic variation on gene regulation and splicing..
PLoS Genet.
11
(1)
:e1004958
▶ Go to Pubmed
. 2015.
Tracking donor-reactive T cells: Evidence for clonal deletion in tolerant kidney transplant patients..
Sci Transl Med.
7
(272)
:272ra10
▶ Go to Pubmed
. 2015.
Recent progress in understanding transcription factor binding specificity..
Brief Funct Genomics.
14
(1)
:1-2
▶ Go to Pubmed
. 2015.
. 2015.
A systems approach to drug discovery in Alzheimer's disease..
Neurotherapeutics.
12
(1)
:126-31
▶ Go to Pubmed
. 2015.
Single-molecule dataset (SMD): a generalized storage format for raw and processed single-molecule data..
BMC Bioinformatics.
16
(1)
:3
▶ Go to Pubmed
. 2015.
An oncogenic enhancer enemy (N-Me) in T-ALL..
Cell Cycle.
14
(2)
:167-8
▶ Go to Pubmed
. 2015.
Viral diversity and clonal evolution from unphased genomic data..
BMC Genomics.
15
(Suppl 6)
:S17
▶ Go to Pubmed
. 2014.
Low affinity binding site clusters confer hox specificity and regulatory robustness..
Cell.
160
(1-2)
:191-203
▶ Go to Pubmed
. 2015.
. 2014.
Modelling bladder cancer in mice: opportunities and challenges..
Nat Rev Cancer.
15
(1)
:42-54
▶ Go to Pubmed
. 2015.
. 2014.
The Cyni framework for network inference in Cytoscape..
Bioinformatics.
▶ Go to Pubmed
. 2014.
. 2014.
. 2014.
Gene age predicts the strength of purifying selection acting on gene expression variation in humans..
Am J Hum Genet.
95
(6)
:660-74
▶ Go to Pubmed
. 2014.
Integrative analysis of T cell motility from multi-channel microscopy data using TIAM..
J Immunol Methods.
416
:84-93
▶ Go to Pubmed
. 2015.
. 2014.
. 2014.
State of the Art and Development of a Drug-Drug Interaction Large Scale Predictor Based on 3D Pharmacophoric Similarity..
Curr Drug Metab.
15
(5)
:490-501
▶ Go to Pubmed
. 2014.
. 2014.
. 2015.
Predicting protein networks in cancer..
Nat Genet.
46
(12)
:1252-3
▶ Go to Pubmed
. 2014.
. 2014.
. 2014.
Inactivation of the ferroptosis regulator Gpx4 triggers acute renal failure in mice..
Nat Cell Biol.
16
(12)
:1180-91
▶ Go to Pubmed
. 2014.
Prediction of resistance development against drug combinations by collateral responses to component drugs..
Sci Transl Med.
6
(262)
:262ra156
▶ Go to Pubmed
. 2014.
Synchronized renal tubular cell death involves ferroptosis..
Proc Natl Acad Sci U S A.
▶ Go to Pubmed
. 2014.
Coding mutations in SORL1 and Alzheimer disease..
Ann Neurol.
77
(2)
:215-27
▶ Go to Pubmed
. 2015.
. 2014.
Long-term phenotypic evolution of bacteria..
Nature.
517
(7534)
:369-72
▶ Go to Pubmed
. 2015.
. 2014.
. 2014.
From blastocyst to gastrula: gene regulatory networks of embryonic stem cells and early mouse embryogenesis..
Philos Trans R Soc Lond B Biol Sci.
369
(1657)
▶ Go to Pubmed
. 2014.
. 2014.
. 2014.
. 2014.
. 2014.
Evolving insights on how cytosine methylation affects protein-DNA binding..
Brief Funct Genomics.
▶ Go to Pubmed
. 2014.
Toward better benchmarking: challenge-based methods assessment in cancer genomics..
Genome Biol.
15
(9)
:462
▶ Go to Pubmed
. 2014.
Inferring protein modulation from gene expression data using conditional mutual information..
PLoS One.
9
(10)
:e109569
▶ Go to Pubmed
. 2014.
Transfer of noncoding DNA drives regulatory rewiring in bacteria..
Proc Natl Acad Sci U S A.
▶ Go to Pubmed
. 2014.
. 2014.
Transcriptome reconstruction and annotation of cynomolgus and African green monkey..
BMC Genomics.
15
(1)
:846
▶ Go to Pubmed
. 2014.
. 2014.
. 2014.
. 2014.
Structural and energetic determinants of adhesive binding specificity in type I cadherins..
Proc Natl Acad Sci U S A.
▶ Go to Pubmed
. 2014.
Similarity-based modeling applied to signal detection in pharmacovigilance..
CPT Pharmacometrics Syst Pharmacol.
3
:e137
▶ Go to Pubmed
. 2014.
Breast Cancer Prognostic Biomarker Using Attractor Metagenes and the FGD3-SUSD3 Metagene..
Cancer Epidemiol Biomarkers Prev.
▶ Go to Pubmed
. 2014.
. 2014.
Allelic mapping bias in RNA-sequencing is not a major confounder in eQTL studies..
Genome Biol.
15
(9)
:467
▶ Go to Pubmed
. 2014.
Co-regulated Transcripts Associated to Cooperating eSNPs Define Bi-fan Motifs in Human Gene Networks..
PLoS Genet.
10
(9)
:e1004587
▶ Go to Pubmed
. 2014.
. 2014.
. 2014.
. 2014.
An RNA-Sequencing Transcriptome and Splicing Database of Glia, Neurons, and Vascular Cells of the Cerebral Cortex..
J Neurosci.
34
(36)
:11929-47
▶ Go to Pubmed
. 2014.
. 2014.
. 2014.
. 2014.
. 2014.
cgChIP: A Cell Type- and Gene-Specific Method for Chromatin Analysis..
Methods Mol Biol.
1196
:291-306
▶ Go to Pubmed
. 2014.
. 2014.
Broadening horizons: holistic viewpoints from the Biology of Genomes..
Genome Biol.
15
(7)
:416
▶ Go to Pubmed
. 2014.
. 2014.
Ribosome profiling reveals a cell-type-specific translational landscape in brain tumors..
J Neurosci.
34
(33)
:10924-36
▶ Go to Pubmed
. 2014.
Transcriptome sequencing from diverse human populations reveals differentiated regulatory architecture..
PLoS Genet.
10
(8)
:e1004549
▶ Go to Pubmed
. 2014.
Multiple LacI-mediated loops revealed by Bayesian statistics and tethered particle motion..
Nucleic Acids Res.
42
(16)
:10265-77
▶ Go to Pubmed
. 2014.
. 2014.
MRI-localized biopsies reveal subtype-specific differences in molecular and cellular composition at the margins of glioblastoma..
Proc Natl Acad Sci U S A.
111
(34)
:12550-5
▶ Go to Pubmed
. 2014.
Analyses of tumor-suppressor genes in germline mouse models of cancer..
Cold Spring Harb Protoc.
2014
(8)
:pdb.top069773
▶ Go to Pubmed
. 2014.
Distribution and medical impact of loss-of-function variants in the Finnish founder population..
PLoS Genet.
10
(7)
:e1004494
▶ Go to Pubmed
. 2014.
Multidimensional profiling in the investigation of small-molecule-induced cell death..
Methods Enzymol.
545
:265-302
▶ Go to Pubmed
. 2014.
. 2014.
. 2014.
. 2014.
. 2014.
. 2014.
Determinants of Mutation Rate Variation in the Human Germline..
Annu Rev Genomics Hum Genet.
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. 2014.
FGF5 is a crucial regulator of hair length in humans..
Proc Natl Acad Sci U S A.
▶ Go to Pubmed
. 2014.